STIP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, STIP1 protein abundance is significantly associated with the RNA expression of many other genes, with 11,634 significant associations in total. OV shows the largest number of these associations.

The most reproducible STIP1-associated genes across cancer lineages are TRMT112, TMEM223, and MRPL49. Each is linked with STIP1 in more than 7 cancer types. Because this analysis shows association rather than direction, both STIP1-to-partner and partner-to-STIP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STIP1 versus TRMT112 in OV, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STIP1→partner) and Y-score (partner→STIP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTRMT112 →+0.653+0.360<.001<.00138
HNSCTMEM223 →+0.537+0.225.003.00437
UCECMRPL49 →+0.640+0.241.002<.00136
OVABCA6 →-1.333-0.500<.001<.00136
HNSCOTUB1 →+0.396+0.205<.001<.00136
OVSLIT3 →-1.070-0.263<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,634 associations by consensus.

STIP1 vs TRMT112 — OV

Per-sample scatter of STIP1 vs TRMT112 in OV (Pearson r = 0.44).

Explore this scatter interactively →

Exploration