ST8SIA4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ST8SIA4 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible ST8SIA4-associated genes across cancer lineages are CCL7, OR13D1, and LCE1C. Each is linked with ST8SIA4 in more than 1 cancer types. Because this analysis shows association rather than direction, both ST8SIA4-to-partner and partner-to-ST8SIA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCL7 grouped by ST8SIA4-low versus ST8SIA4-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ST8SIA4→partner) and Y-score (partner→ST8SIA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCCCL7 →+0.376+4.044<.001.00931
LUNG_SCLCOR13D1 →+0.043+4.269<.001.00531
LUNG_SCLCLCE1C →+0.672+4.643<.001.00431
LUNG_SCLCKPRP →+0.438+4.044<.001.00931
LUNG_SCLCLCE1F →+0.107+4.643<.001.00431
SKINRBMY1J →+0.006+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

CCL7 by ST8SIA4 expression — LUNG_SCLC

Box plot of CCL7 in ST8SIA4-low vs ST8SIA4-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration