ST7

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ST7 mutation is significantly associated with the total protein of many other genes, with 56 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ST7-associated genes across cancer lineages are Notch1, ATM, and p62 Lck ligand. Each is linked with ST7 in more than 2 cancer types. Because this analysis shows association rather than direction, both ST7-to-partner and partner-to-ST7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Notch1 grouped by ST7-low versus ST7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ST7→partner) and Y-score (partner→ST7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNotch1 →+0.146+2.000.003.00333
UCECATM →-0.564-2.571<.001.01033
LUSCp62 Lck ligand →+0.704+2.816.027.03632
LUSCCaspase-7-cleavedD198 →+0.787+2.816.004.03632
SKCMGAPDH →+0.708+3.000.035.03632
SKCMPKC-delta_pS664 →+0.219+3.000.041.03632
Each partner links to its Q-omics profile. Showing the 6 strongest of 56 associations by consensus.

Notch1 by ST7 expression — UCEC

Box plot of Notch1 in ST7-low vs ST7-high samples in UCEC.

Explore this box plot interactively →

Exploration