Across TCGA patient cohorts, SSX9P mutation is significantly associated with the RNA expression of many other genes, with 630 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SSX9P-associated genes across cancer lineages are RNU6-484P, RNA5SP419, and PLCE1P1. Each is linked with SSX9P in more than 1 cancer types. Because this analysis shows association rather than direction, both SSX9P-to-partner and partner-to-SSX9P results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SSX9P→partner) and Y-score (partner→SSX9P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNU6-484P →	+0.625	+2.652	<.001	.001	3	2
UCEC	RNA5SP419 →	+0.685	+2.591	<.001	.004	3	2
BRCA	PLCE1P1 →	+0.239	+7.731	<.001	.009	3	1
SKCM	CDC42P2 →	+0.236	+3.801	.001	.005	3	1
SKCM	GEMIN2P2 →	+0.052	+3.408	<.001	.009	3	1
SKCM	TSPY12P →	+0.075	+5.219	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 630 associations by consensus.

Exploration

SSX9P survival (RNA) · tumor vs normal (RNA) · all SSX9P data types