SSU72P8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SSU72P8 mutation is significantly associated with the RNA expression of many other genes, with 680 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SSU72P8-associated genes across cancer lineages are RNU6-441P, SPTSSA, and UQCRFS1P3. Each is linked with SSU72P8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SSU72P8-to-partner and partner-to-SSU72P8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-441P grouped by SSU72P8-low versus SSU72P8-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SSU72P8→partner) and Y-score (partner→SSU72P8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-441P →+0.138+3.885<.001.00832
LUSCSPTSSA →+0.712+3.471.008.00232
SKCMUQCRFS1P3 →+0.060+3.302.008.00932
UCECESS2 →+0.340+3.711.004<.00131
UCECCRYBB2P1 →+0.610+3.385.001.00431
UCECFBXO7 →+0.449+3.721.006<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 680 associations by consensus.

RNU6-441P by SSU72P8 expression — UCEC

Box plot of RNU6-441P in SSU72P8-low vs SSU72P8-high samples in UCEC.

Explore this box plot interactively →

Exploration