SST

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SST protein abundance is significantly associated with the RNA expression of many other genes, with 5,958 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SST-associated genes across cancer lineages are ASRGL1, LRRC15, and MRAP2. Each is linked with SST in more than 2 cancer types. Because this analysis shows association rather than direction, both SST-to-partner and partner-to-SST results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SST versus ASRGL1 in OV, with a Pearson correlation of 0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SST→partner) and Y-score (partner→SST) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVASRGL1 →+1.664+1.165<.001.00433
OVLRRC15 →-1.521-1.142.007.00533
LUADMRAP2 →+0.710+1.782.003.00433
GBMVIT →+0.440+1.312.002<.00133
GBMCLEC5A →-0.758-0.758<.001.00433
GBMMTMR7 →+0.781+1.250<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,958 associations by consensus.

SST vs ASRGL1 — OV

Per-sample scatter of SST vs ASRGL1 in OV (Pearson r = 0.54).

Explore this scatter interactively →

Exploration