SSR4P1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SSR4P1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,147 significant associations in total. THCA shows the largest number of these associations.

The most reproducible SSR4P1-associated GO terms across cancer lineages are Regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning, Smoothened signaling pathway, and Regulation of smoothened signaling pathway. Each is linked with SSR4P1 in more than 24 cancer types. Because this analysis shows association rather than direction, both SSR4P1-to-partner and partner-to-SSR4P1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SSR4P1→partner) and Y-score (partner→SSR4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRegulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning →+0.057+0.494<.001<.001325
ESCASmoothened signaling pathway →+0.038+0.393<.001<.001322
ESCARegulation of smoothened signaling pathway →+0.039+0.345<.001<.001322
TGCTSmoothened signaling pathway involved in dorsal/ventral neural tube patterning →+0.076+0.823<.001<.001322
ESCANeural tube development →+0.051+0.487.001<.001321
PAADResponse to type I interferon →+0.038+0.356<.001<.001320
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,147 associations by consensus.

Exploration