SSR4P1

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SSR4P1 mutation is significantly associated with the immune_cell of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SSR4P1-associated genes across cancer lineages are Class-switched memory B-cells, Endothelial cells, and lymphatic Endothelial cells. Each is linked with SSR4P1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SSR4P1-to-partner and partner-to-SSR4P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Class-switched memory B-cells grouped by SSR4P1-low versus SSR4P1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SSR4P1→partner) and Y-score (partner→SSR4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECClass-switched memory B-cells →-0.063-3.169.044.02011
UCECEndothelial cells →-0.044-3.127.034.02011
UCEClymphatic Endothelial cells →-0.028-3.116.034.02011
UCECmv Endothelial cells →-0.027-3.159.036.02011
UCECPlasma cells →-0.027-3.127.023.02011
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

Class-switched memory B-cells by SSR4P1 expression — UCEC

Box plot of Class-switched memory B-cells in SSR4P1-low vs SSR4P1-high samples in UCEC.

Explore this box plot interactively →

Exploration