SSBP4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SSBP4 protein abundance is significantly associated with the RNA expression of many other genes, with 880 significant associations in total. BLOOD_Myeloma shows the largest number of these associations.

The most reproducible SSBP4-associated genes across cancer lineages are ASIP, PRMT1, and SMAD7. Each is linked with SSBP4 in more than 2 cancer types. Because this analysis shows association rather than direction, both SSBP4-to-partner and partner-to-SSBP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SSBP4 versus ASIP in CNS, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SSBP4→partner) and Y-score (partner→SSBP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSASIP →+0.335+1.892.002<.00133
PANCREASPRMT1 →+0.903+1.111<.001.00533
BLOOD_MyelomaSMAD7 →-1.725-1.406.006.00433
BLOOD_MyelomaHHAT →-2.196-1.906.005.00233
BREASTZNF880 →+3.577+1.262.003.00633
CNSRLIM →-0.656-1.334<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 880 associations by consensus.

SSBP4 vs ASIP — CNS

Per-sample scatter of SSBP4 vs ASIP in CNS (Pearson r = 0.49).

Explore this scatter interactively →

Exploration