SSBP3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SSBP3 mutation is significantly associated with the RNA expression of many other genes, with 2,001 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SSBP3-associated genes across cancer lineages are ZNHIT3, TAF9, and CHEK1. Each is linked with SSBP3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SSBP3-to-partner and partner-to-SSBP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZNHIT3 grouped by SSBP3-low versus SSBP3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SSBP3→partner) and Y-score (partner→SSBP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZNHIT3 →+0.456+2.665<.001<.00132
UCECTAF9 →+0.661+2.263<.001<.00132
UCECCHEK1 →+0.692+4.021<.001<.00132
COADPELO →+0.405+3.250.002.00832
UCECRAD17 →+0.464+2.642<.001<.00132
UCECCENPH →+0.573+2.906<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,001 associations by consensus.

ZNHIT3 by SSBP3 expression — UCEC

Box plot of ZNHIT3 in SSBP3-low vs SSBP3-high samples in UCEC.

Explore this box plot interactively →

Exploration