SSBP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SSBP1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,471 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SSBP1-associated genes across cancer lineages are FASTK, REPIN1, and ACTR3B. Each is linked with SSBP1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SSBP1-to-partner and partner-to-SSBP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SSBP1 versus FASTK in HNSC, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SSBP1→partner) and Y-score (partner→SSBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCFASTK →+0.826+0.334<.001<.00138
COADREPIN1 →+0.697+0.604<.001<.00138
OVACTR3B →+0.564+0.454<.001<.00138
LSCCMKRN1 →+0.617+0.578<.001<.00137
UCECZNF282 →+0.605+0.296.004.00937
HNSCCHCHD3 →+0.583+0.311.006<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,471 associations by consensus.

SSBP1 vs FASTK — HNSC

Per-sample scatter of SSBP1 vs FASTK in HNSC (Pearson r = 0.34).

Explore this scatter interactively →

Exploration