SS18L2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SS18L2 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SS18L2-associated genes across cancer lineages are RNU6-1075P. Each is linked with SS18L2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SS18L2-to-partner and partner-to-SS18L2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1075P grouped by SS18L2-low versus SS18L2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SS18L2→partner) and Y-score (partner→SS18L2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-1075P →+0.637+8.066<.001.00731
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

RNU6-1075P by SS18L2 expression — UCEC

Box plot of RNU6-1075P in SS18L2-low vs SS18L2-high samples in UCEC.

Explore this box plot interactively →

Exploration