Across TCGA patient cohorts, SS18L1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,411 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SS18L1-associated genes across cancer lineages are S100A10, CSTF1, and PRPF6. Each is linked with SS18L1 in more than 4 cancer types. Because this analysis shows association rather than direction, both SS18L1-to-partner and partner-to-SS18L1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SS18L1→partner) and Y-score (partner→SS18L1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	S100A10 →	-1.454	-0.586	<.001	<.001	3	5
LSCC	CSTF1 →	+0.378	+0.480	.003	.003	3	4
BRCA	PRPF6 →	+0.673	+0.429	<.001	.005	3	4
LSCC	GID8 →	+0.571	+0.494	<.001	<.001	3	4
UCEC	CCL20 →	-1.526	-0.334	.001	.004	3	4
GBM	SRGN →	-0.766	-0.354	<.001	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,411 associations by consensus.

Exploration

SS18L1 survival (RNA) · tumor vs normal (RNA) · all SS18L1 data types