SS18

Across TCGA patient cohorts, SS18 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,710 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SS18-associated proteins across cancer lineages are NARS1, ZNF24, and RPRD1A. Each is linked with SS18 in more than 4 cancer types. Because this analysis shows association rather than direction, both SS18-to-partner and partner-to-SS18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SS18 versus NARS1 in LSCC, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SS18→partner) and Y-score (partner→SS18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	NARS1 →	+0.309	+0.331	<.001	.004	3	5
COAD	ZNF24 →	+0.458	+0.581	<.001	<.001	3	5
BRCA	RPRD1A →	+0.369	+0.580	<.001	<.001	3	5
LSCC	DSG2 →	+0.499	+0.362	<.001	<.001	3	5
LUAD	RELCH →	+0.266	+0.287	<.001	<.001	3	5
COAD	SMAD2 →	+0.358	+0.483	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,710 associations by consensus.

SS18 vs NARS1 — LSCC

Explore this scatter interactively →