SRRM4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SRRM4 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,937 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SRRM4-associated proteins across cancer lineages are B4GALT1, BSN_S2851, and CRYM. Each is linked with SRRM4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SRRM4-to-partner and partner-to-SRRM4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SRRM4 versus B4GALT1 in GBM, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SRRM4→partner) and Y-score (partner→SRRM4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMB4GALT1 →-0.549-0.859<.001<.00132
GBMBSN_S2851 →+1.716+0.991<.001<.00132
GBMCRYM →+0.739+0.723<.001<.00132
GBMGIT1 →+0.234+1.039<.001<.00132
UCECJPT2 →-0.284-0.387.001.00532
GBMPDE4D →+0.541+1.003<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,937 associations by consensus.

SRRM4 vs B4GALT1 — GBM

Per-sample scatter of SRRM4 vs B4GALT1 in GBM (Pearson r = -0.34).

Explore this scatter interactively →

Exploration