SRRM1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SRRM1 mutation is significantly associated with the RNA expression of many other genes, with 2,957 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SRRM1-associated genes across cancer lineages are UQCR10, OR10K2, and DTYMK. Each is linked with SRRM1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SRRM1-to-partner and partner-to-SRRM1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UQCR10 grouped by SRRM1-low versus SRRM1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SRRM1→partner) and Y-score (partner→SRRM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECUQCR10 →+0.258+1.617.002.00234
HNSCOR10K2 →+0.075+5.578<.001.00434
UCECDTYMK →+0.506+2.818<.001<.00134
HNSCRNA5SP384 →+0.567+5.124<.001.00833
SKCMMRPL52 →+0.462+2.813<.001.00133
UCECAURKB →+0.458+1.823.004.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,957 associations by consensus.

UQCR10 by SRRM1 expression — UCEC

Box plot of UQCR10 in SRRM1-low vs SRRM1-high samples in UCEC.

Explore this box plot interactively →

Exploration