SRRM1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SRRM1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,580 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SRRM1-associated genes across cancer lineages are DARS1, TUBG1, and KLHL17. Each is linked with SRRM1 in more than 11 cancer types. Because this analysis shows association rather than direction, both SRRM1-to-partner and partner-to-SRRM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SRRM1 versus DARS1 in BREAST, with a Pearson correlation of 0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SRRM1→partner) and Y-score (partner→SRRM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTDARS1 →+0.978+1.030<.001<.001312
PANCREASTUBG1 →+1.078+1.054<.001.00135
SKINKLHL17 →+1.000+0.505.001.00835
SKINUBE2K →+0.514+0.445.003.00235
BLOOD_LeukemiaSLC27A3 →+1.739+0.459<.001<.00135
BLOOD_MyelomaDPH5 →+1.362+0.747.004<.00125
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,580 associations by consensus.

SRRM1 vs DARS1 — BREAST

Per-sample scatter of SRRM1 vs DARS1 in BREAST (Pearson r = 0.60).

Explore this scatter interactively →

Exploration