SRL

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SRL RNA expression is significantly associated with the protein abundance of many other proteins, with 18,394 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SRL-associated proteins across cancer lineages are ITGA7, LMOD1, and CAVIN2. Each is linked with SRL in more than 6 cancer types. Because this analysis shows association rather than direction, both SRL-to-partner and partner-to-SRL results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SRL→partner) and Y-score (partner→SRL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAITGA7 →+1.138+0.289<.001<.00137
UCECLMOD1 →+1.048+0.398<.001.00137
BRCACAVIN2 →+0.733+0.173<.001<.00137
CCRCCCD34 →+0.781+0.456<.001<.00137
UCECFHL5 →+1.096+0.568<.001<.00137
BRCANOSTRIN →+0.743+0.179<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,394 associations by consensus.

Exploration