SRCIN1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SRCIN1 mutation is significantly associated with the RNA expression of many other genes, with 693 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SRCIN1-associated genes across cancer lineages are C1QA, ZMYND8, and PSMA7. Each is linked with SRCIN1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SRCIN1-to-partner and partner-to-SRCIN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C1QA grouped by SRCIN1-low versus SRCIN1-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SRCIN1→partner) and Y-score (partner→SRCIN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINC1QA →+0.051+2.793.002.00232
LARGE_INTESTINEZMYND8 →-0.550-2.126.008<.00132
LARGE_INTESTINEPSMA7 →-0.431-3.636.001<.00132
LARGE_INTESTINEPPDPF →-0.610-2.126.003<.00132
LARGE_INTESTINERALY →-0.389-3.459.006.00132
LARGE_INTESTINERELL2 →-1.092-2.126<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 693 associations by consensus.

C1QA by SRCIN1 expression — SKIN

Box plot of C1QA in SRCIN1-low vs SRCIN1-high samples in SKIN.

Explore this box plot interactively →

Exploration