SRC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SRC protein abundance is significantly associated with the RNA expression of many other genes, with 12,478 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SRC-associated genes across cancer lineages are NORAD, SDC4, and CALHM2. Each is linked with SRC in more than 5 cancer types. Because this analysis shows association rather than direction, both SRC-to-partner and partner-to-SRC results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SRC→partner) and Y-score (partner→SRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNORAD →+0.523+0.283.009.00836
HNSCSDC4 →+0.676+0.187<.001.00135
UCECCALHM2 →-0.768-0.208<.001.00635
LSCCBLCAP →+0.621+0.282<.001<.00135
BRCAPEDS1 →+0.682+0.462<.001<.00135
COADSGK2 →+0.935+0.222<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,478 associations by consensus.

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