SPTBN4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPTBN4 mutation is significantly associated with the total protein of many other genes, with 91 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPTBN4-associated genes across cancer lineages are 4E-BP1, ASNS, and MIG-6. Each is linked with SPTBN4 in more than 5 cancer types. Because this analysis shows association rather than direction, both SPTBN4-to-partner and partner-to-SPTBN4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 4E-BP1 grouped by SPTBN4-low versus SPTBN4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPTBN4→partner) and Y-score (partner→SPTBN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC4E-BP1 →+0.284+1.478<.001<.00136
COADASNS →+0.488+1.882.003.03134
COADMIG-6 →+0.095+2.644.022.00534
BLCABak →+0.185+2.919.001<.00133
BLCABcl-2 →-0.161-2.087.014.00533
BLCACD31 →-0.209-2.567<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 91 associations by consensus.

4E-BP1 by SPTBN4 expression — UCEC

Box plot of 4E-BP1 in SPTBN4-low vs SPTBN4-high samples in UCEC.

Explore this box plot interactively →

Exploration