SPSB3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPSB3 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,090 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SPSB3-associated proteins across cancer lineages are NUDT16L1, RBM12B, and ZZEF1_S1464. Each is linked with SPSB3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SPSB3-to-partner and partner-to-SPSB3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPSB3 versus NUDT16L1 in OV, with a Pearson correlation of 0.27.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SPSB3→partner) and Y-score (partner→SPSB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNUDT16L1 →+0.345+0.169.001<.00133
OVRBM12B →+0.174+0.183.005<.00133
LSCCZZEF1_S1464 →-0.653-0.085<.001.00232
BRCAOSCP1 →+0.501+0.231<.001<.00132
BRCAPHKG2 →+0.263+0.210.006.00232
BRCAPJA1_S365 →-0.453-0.157.007.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,090 associations by consensus.

SPSB3 vs NUDT16L1 — OV

Per-sample scatter of SPSB3 vs NUDT16L1 in OV (Pearson r = 0.27).

Explore this scatter interactively →

Exploration