SPSB1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPSB1 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SPSB1-associated genes across cancer lineages are CLEC4C. Each is linked with SPSB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPSB1-to-partner and partner-to-SPSB1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CLEC4C grouped by SPSB1-low versus SPSB1-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPSB1→partner) and Y-score (partner→SPSB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINCLEC4C →+0.054+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

CLEC4C by SPSB1 expression — SKIN

Box plot of CLEC4C in SPSB1-low vs SPSB1-high samples in SKIN.

Explore this box plot interactively →

Exploration