SPRR3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPRR3 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SPRR3-associated genes across cancer lineages are BPIFB6 and OR10W1. Each is linked with SPRR3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPRR3-to-partner and partner-to-SPRR3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, BPIFB6 grouped by SPRR3-low versus SPRR3-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPRR3→partner) and Y-score (partner→SPRR3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEBPIFB6 →+0.033+6.022<.001.00131
LARGE_INTESTINEOR10W1 →+0.019+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

BPIFB6 by SPRR3 expression — LARGE_INTESTINE

Box plot of BPIFB6 in SPRR3-low vs SPRR3-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration