SPRED2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPRED2 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible SPRED2-associated genes across cancer lineages are UTF1, FDCSP, and IQCF5. Each is linked with SPRED2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPRED2-to-partner and partner-to-SPRED2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPRED2→partner) and Y-score (partner→SPRED2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEUTF1 →+0.018+3.632<.001.00331
LARGE_INTESTINEFDCSP →+0.681+3.453<.001.00931
LARGE_INTESTINEIQCF5 →+0.025+4.022<.001.00631
BREASTOOSP2 →+0.023+5.781<.001.00131
BREASTOR10J5 →+0.071+5.169<.001.00531
BREASTOR10J1 →+0.566+5.781<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Exploration