SPPL2C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPPL2C mutation is significantly associated with the RNA expression of many other genes, with 2,870 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPPL2C-associated genes across cancer lineages are ADAMTSL2, TIMM9, and RBBP8. Each is linked with SPPL2C in more than 3 cancer types. Because this analysis shows association rather than direction, both SPPL2C-to-partner and partner-to-SPPL2C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPPL2C→partner) and Y-score (partner→SPPL2C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMADAMTSL2 →-0.631-3.565.002.00234
SKCMTIMM9 →+0.452+2.279.001.00133
SKCMRBBP8 →+0.678+1.854.002.00533
UCECZWINT →+0.821+2.584<.001<.00133
UCECPARP2 →+0.395+2.440.002<.00133
SKCMNKD2 →-0.806-3.788<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,870 associations by consensus.

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