SPOPL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPOPL protein abundance is significantly associated with the RNA expression of many other genes, with 74 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SPOPL-associated genes across cancer lineages are ETV7, EIF3B, and UGDH. Each is linked with SPOPL in more than 1 cancer types. Because this analysis shows association rather than direction, both SPOPL-to-partner and partner-to-SPOPL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPOPL versus ETV7 in BRCA, with a Pearson correlation of -0.87.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPOPL→partner) and Y-score (partner→SPOPL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAETV7 →-3.003-0.959.007.00631
BRCAEIF3B →-0.853-0.593.001.00631
BRCAUGDH →+1.803+0.570.002.00931
BRCAALG2 →+1.423+1.003.004.00531
BRCAZNF835 →+0.880+0.409.001.00831
BRCADUSP26 →-0.731-0.593.006.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 74 associations by consensus.

SPOPL vs ETV7 — BRCA

Per-sample scatter of SPOPL vs ETV7 in BRCA (Pearson r = -0.87).

Explore this scatter interactively →

Exploration