SPN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPN protein abundance is significantly associated with the RNA expression of many other genes, with 15,240 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SPN-associated genes across cancer lineages are CYTH4, CSF2RB, and TLR8. Each is linked with SPN in more than 9 cancer types. Because this analysis shows association rather than direction, both SPN-to-partner and partner-to-SPN results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPN→partner) and Y-score (partner→SPN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCYTH4 →+1.017+0.674<.001<.001310
OVCSF2RB →+1.126+0.918<.001<.001310
GBMTLR8 →+0.940+0.591<.001<.001310
HNSCNKG7 →+1.620+0.652<.001<.001310
OVBTK →+1.062+0.924<.001<.001310
OVABI3 →+1.072+0.882<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,240 associations by consensus.

Exploration