SPINK8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPINK8 protein abundance is significantly associated with the RNA expression of many other genes, with 190 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SPINK8-associated genes across cancer lineages are PCDHB3, GDA, and OR1J1. Each is linked with SPINK8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPINK8-to-partner and partner-to-SPINK8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPINK8 versus PCDHB3 in BRCA, with a Pearson correlation of 0.96.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPINK8→partner) and Y-score (partner→SPINK8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPCDHB3 →+3.635+0.769.002.00431
BRCAGDA →+0.040+0.699.007<.00131
BRCAOR1J1 →+0.537+0.796.003.00331
BRCAUNC93B2 →+0.229+0.569<.001.00231
BRCAATP2B2 →+0.282+0.796.006.00331
BRCAC16orf78 →+0.206+0.569.005.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 190 associations by consensus.

SPINK8 vs PCDHB3 — BRCA

Per-sample scatter of SPINK8 vs PCDHB3 in BRCA (Pearson r = 0.96).

Explore this scatter interactively →

Exploration