SPEF1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPEF1 protein abundance is significantly associated with the RNA expression of many other genes, with 2,427 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SPEF1-associated genes across cancer lineages are BPIFB1, CFAP91, and C6orf118. Each is linked with SPEF1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SPEF1-to-partner and partner-to-SPEF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPEF1 versus BPIFB1 in LSCC, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPEF1→partner) and Y-score (partner→SPEF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCBPIFB1 →+4.661+1.335<.001.00123
UCECCFAP91 →+1.449+0.862.004.00432
LUADC6orf118 →+1.520+0.939<.001<.00132
LUADADGB →+1.029+1.054<.001<.00132
LSCCC20orf85 →+3.085+1.556<.001<.00132
LSCCCACNG6 →+0.868+1.179.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,427 associations by consensus.

SPEF1 vs BPIFB1 — LSCC

Per-sample scatter of SPEF1 vs BPIFB1 in LSCC (Pearson r = 0.55).

Explore this scatter interactively →

Exploration