SPDYE5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPDYE5 mutation is significantly associated with the total protein of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPDYE5-associated genes across cancer lineages are Tuberin, VHL, and Fibronectin. Each is linked with SPDYE5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPDYE5-to-partner and partner-to-SPDYE5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Tuberin grouped by SPDYE5-low versus SPDYE5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPDYE5→partner) and Y-score (partner→SPDYE5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTuberin →+0.421+3.169.004.02021
UCECVHL →-1.334-3.169<.001.01921
UCECFibronectin →-0.494-3.169.006.02011
UCECDi-Ras3 →-0.285-3.169<.001.02011
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Tuberin by SPDYE5 expression — UCEC

Box plot of Tuberin in SPDYE5-low vs SPDYE5-high samples in UCEC.

Explore this box plot interactively →

Exploration