SPATS2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPATS2 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible SPATS2-associated genes across cancer lineages are SERPINA7, C1orf158, and OR2T35. Each is linked with SPATS2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPATS2-to-partner and partner-to-SPATS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SERPINA7 grouped by SPATS2-low versus SPATS2-high in BLOOD_Myeloma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATS2→partner) and Y-score (partner→SPATS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaSERPINA7 →+0.459+4.807<.001.00631
BLOOD_MyelomaC1orf158 →+0.053+4.807<.001.00631
BLOOD_MyelomaOR2T35 →+0.086+4.807<.001.00631
LARGE_INTESTINESLC17A6 →+0.023+4.977<.001.00731
OVARYASB17 →+0.017+4.807<.001.00331
OVARYC12orf40 →+0.011+4.029<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

SERPINA7 by SPATS2 expression — BLOOD_Myeloma

Box plot of SERPINA7 in SPATS2-low vs SPATS2-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration