SPATA8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA8 mutation is significantly associated with the RNA expression of many other genes, with 1,085 significant associations in total. LUSC shows the largest number of these associations.

The most reproducible SPATA8-associated genes across cancer lineages are OR4P4, OR2P1P, and HMGN2P5. Each is linked with SPATA8 in more than 2 cancer types. Because this analysis shows association rather than direction, both SPATA8-to-partner and partner-to-SPATA8 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA8→partner) and Y-score (partner→SPATA8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECOR4P4 →+0.126+3.356<.001.00533
HNSCOR2P1P →+0.043+4.655<.001.00732
SKCMHMGN2P5 →+0.648+2.743<.001<.00132
SKCMSUMO1P3 →+0.457+1.879<.001.00432
LUSCRPS3AP48 →+0.259+3.422<.001.00932
BLCAMIR30A →+0.557+7.640<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,085 associations by consensus.

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