SPATA45

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA45 mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SPATA45-associated genes across cancer lineages are MIR6133, FECHP1, and NIPA2P5. Each is linked with SPATA45 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPATA45-to-partner and partner-to-SPATA45 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA45→partner) and Y-score (partner→SPATA45) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR6133 →+0.391+5.867<.001.00331
SKCMFECHP1 →+0.041+6.199<.001.00131
SKCMNIPA2P5 →+0.106+6.199<.001.00131
SKCMAK4P2 →+0.068+5.037.001.00931
UCECPPP1R26P4 →+0.006+4.555<.001.00531
SKCMMT-TD →+0.563+5.771<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

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