SPATA21

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPATA21 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,584 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SPATA21-associated GO terms across cancer lineages are Negative regulation of mRNA splicing, via spliceosome, Metaphase/anaphase transition of mitotic cell cycle, and Negative regulation of DNA-templated transcription initiation. Each is linked with SPATA21 in more than 8 cancer types. Because this analysis shows association rather than direction, both SPATA21-to-partner and partner-to-SPATA21 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA21→partner) and Y-score (partner→SPATA21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaNegative regulation of mRNA splicing, via spliceosome →+0.096+0.131<.001<.00139
LUNG_NSCLC_LUSCMetaphase/anaphase transition of mitotic cell cycle →+0.139+0.127.001.00839
BONENegative regulation of DNA-templated transcription initiation →+0.109+0.176<.001<.00138
BLOOD_LymphomaNegative regulation of RNA splicing →+0.090+0.128<.001.00138
BONEMetaphase/anaphase transition of cell cycle →+0.163+0.193.007<.00129
BLOOD_LymphomaNegative regulation of mRNA processing →+0.093+0.118<.001.00238
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,584 associations by consensus.

Exploration