SPATA19

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA19 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,803 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SPATA19-associated GO terms across cancer lineages are Protein insertion into membrane, Positive regulation of peptidase activity, and Mitochondrial respiratory chain complex assembly. Each is linked with SPATA19 in more than 9 cancer types. Because this analysis shows association rather than direction, both SPATA19-to-partner and partner-to-SPATA19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein insertion into membrane grouped by SPATA19-low versus SPATA19-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA19→partner) and Y-score (partner→SPATA19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADProtein insertion into membrane →+0.069+0.051<.001<.001310
STADPositive regulation of peptidase activity →+0.057+0.056<.001<.00139
STADMitochondrial respiratory chain complex assembly →+0.069+0.053<.001<.00139
STADTissue regeneration →+0.044+0.044<.001<.00138
STADNADH dehydrogenase complex assembly →+0.071+0.052<.001<.00138
UCECOxidative phosphorylation →+0.077+0.021<.001.00238
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,803 associations by consensus.

Protein insertion into membrane by SPATA19 expression — STAD

Box plot of Protein insertion into membrane in SPATA19-low vs SPATA19-high samples in STAD.

Explore this box plot interactively →

Exploration