SPATA19

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA19 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPATA19-associated genes across cancer lineages are p27_pT198, Bcl-2, and Caspase-7-cleavedD198. Each is linked with SPATA19 in more than 2 cancer types. Because this analysis shows association rather than direction, both SPATA19-to-partner and partner-to-SPATA19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p27_pT198 grouped by SPATA19-low versus SPATA19-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA19→partner) and Y-score (partner→SPATA19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp27_pT198 →+0.167+3.169.004.02031
UCECBcl-2 →-0.488-3.143.010.02031
UCECCaspase-7-cleavedD198 →+0.949+3.169.003.02013
UCECS6_pS235_S236 →+0.594+3.169.012.02021
UCECS6_pS240_S244 →+0.797+3.169<.001.02011
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

p27_pT198 by SPATA19 expression — UCEC

Box plot of p27_pT198 in SPATA19-low vs SPATA19-high samples in UCEC.

Explore this box plot interactively →

Exploration