SPATA19

Across TCGA cell cohorts, SPATA19 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SPATA19-associated genes across cancer lineages are CT47A6 and TNP1. Each is linked with SPATA19 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPATA19-to-partner and partner-to-SPATA19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CT47A6 grouped by SPATA19-low versus SPATA19-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA19→partner) and Y-score (partner→SPATA19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	CT47A6 →	+1.738	+5.029	<.001	.006	3	1
LARGE_INTESTINE	TNP1 →	+0.128	+4.415	<.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

CT47A6 by SPATA19 expression — LUNG_SCLC

Explore this box plot interactively →