SPATA16

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA16 mutation is significantly associated with the RNA expression of many other genes, with 3,093 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPATA16-associated genes across cancer lineages are NDUFAF5, CCNB2, and DONSON. Each is linked with SPATA16 in more than 3 cancer types. Because this analysis shows association rather than direction, both SPATA16-to-partner and partner-to-SPATA16 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NDUFAF5 grouped by SPATA16-low versus SPATA16-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA16→partner) and Y-score (partner→SPATA16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNDUFAF5 →+0.373+2.534<.001<.00134
UCECCCNB2 →+0.593+2.459.004<.00133
UCECDONSON →+0.521+3.732<.001<.00133
UCECPKN3 →+0.661+2.081<.001.00133
UCECSLBP →+0.703+2.949<.001<.00133
UCECC1QBP →+0.560+3.043<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,093 associations by consensus.

NDUFAF5 by SPATA16 expression — UCEC

Box plot of NDUFAF5 in SPATA16-low vs SPATA16-high samples in UCEC.

Explore this box plot interactively →

Exploration