SPAST

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPAST RNA expression is significantly associated with the protein abundance of many other proteins, with 23,768 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SPAST-associated proteins across cancer lineages are USP39, CLASP1, and ZNF638. Each is linked with SPAST in more than 5 cancer types. Because this analysis shows association rather than direction, both SPAST-to-partner and partner-to-SPAST results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPAST versus USP39 in LSCC, with a Pearson correlation of 0.73.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SPAST→partner) and Y-score (partner→SPAST) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCUSP39 →+0.451+0.882<.001<.00136
LSCCCLASP1 →+0.258+0.735<.001<.00136
GBMZNF638 →+0.366+0.596<.001<.00135
LSCCWRNIP1 →+0.369+0.640<.001<.00135
LSCCORC3 →+0.404+0.798<.001<.00135
LSCCORC5 →+0.383+0.789<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 23,768 associations by consensus.

SPAST vs USP39 — LSCC

Per-sample scatter of SPAST vs USP39 in LSCC (Pearson r = 0.73).

Explore this scatter interactively →

Exploration