SPANXN4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPANXN4 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,990 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SPANXN4-associated GO terms across cancer lineages are Blastocyst development, rRNA transcription, and Regulation of double-strand break repair via homologous recombination. Each is linked with SPANXN4 in more than 7 cancer types. Because this analysis shows association rather than direction, both SPANXN4-to-partner and partner-to-SPANXN4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPANXN4→partner) and Y-score (partner→SPANXN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADBlastocyst development →+0.091+0.077<.001<.00138
STADrRNA transcription →+0.112+0.087<.001<.00138
STADRegulation of double-strand break repair via homologous recombination →+0.105+0.082<.001<.00137
STADRegulation of double-strand break repair →+0.103+0.082<.001<.00137
STADPositive regulation of cell growth →+0.086+0.076<.001<.00137
STADMethylation →+0.102+0.093<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,990 associations by consensus.

Exploration