SPANXB1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPANXB1 mutation is significantly associated with the RNA expression of many other genes, with 105 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SPANXB1-associated genes across cancer lineages are MIR626, RN7SKP83, and OR13Z1P. Each is linked with SPANXB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPANXB1-to-partner and partner-to-SPANXB1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPANXB1→partner) and Y-score (partner→SPANXB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCMIR626 →+0.408+5.273<.001.00632
LUSCRN7SKP83 →+0.333+5.093<.001.00832
UCECOR13Z1P →+0.172+4.073<.001.00432
SKCMFAM243B →+0.023+4.640<.001.00331
SKCMH2AB3 →+0.034+5.647<.001<.00131
SKCMLINC01186 →+0.773+3.425<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 105 associations by consensus.

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