SPACA9

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPACA9 protein abundance is significantly associated with the RNA expression of many other genes, with 1,880 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SPACA9-associated genes across cancer lineages are SPEF1, RP1, and CCDC114. Each is linked with SPACA9 in more than 2 cancer types. Because this analysis shows association rather than direction, both SPACA9-to-partner and partner-to-SPACA9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPACA9 versus SPEF1 in UCEC, with a Pearson correlation of 0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPACA9→partner) and Y-score (partner→SPACA9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSPEF1 →+2.120+1.035.007<.00133
UCECRP1 →+1.453+0.906.005<.00133
UCECCCDC114 →+1.217+0.635.001<.00133
UCECRSPH4A →+1.813+0.819.005<.00133
UCECPACRG →+1.316+0.787.006.00233
UCECC6orf118 →+1.860+0.856.005<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,880 associations by consensus.

SPACA9 vs SPEF1 — UCEC

Per-sample scatter of SPACA9 vs SPEF1 in UCEC (Pearson r = 0.61).

Explore this scatter interactively →

Exploration