SOX3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SOX3 protein abundance is significantly associated with the go_rna of many other GO terms, with 610 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible SOX3-associated GO terms across cancer lineages are DNA-templated transcription termination, Corpus callosum development, and Regulation of hydrogen peroxide metabolic process. Each is linked with SOX3 in more than 3 cancer types. Because this analysis shows association rather than direction, both SOX3-to-partner and partner-to-SOX3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA-templated transcription termination grouped by SOX3-low versus SOX3-high in LUNG_NSCLC_LUAD.

protein abundance associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SOX3→partner) and Y-score (partner→SOX3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADDNA-templated transcription termination →+0.078+1.142.001.00233
BLOOD_LymphomaCorpus callosum development →-0.097-1.058.001.00133
BREASTRegulation of hydrogen peroxide metabolic process →-0.148-0.766.003.00333
BLOOD_LymphomaTail-anchored membrane protein insertion into ER membrane →-0.100-1.416<.001<.00133
BONEMetanephric mesenchyme development →+0.184+0.990.007.00433
LUNG_NSCLC_LUADCalcitonin gene-related peptide receptor signaling pathway →-1.863-1.099.004.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 610 associations by consensus.

DNA-templated transcription termination by SOX3 expression — LUNG_NSCLC_LUAD

Box plot of DNA-templated transcription termination in SOX3-low vs SOX3-high samples in LUNG_NSCLC_LUAD.

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Exploration