SOX1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SOX1 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,084 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SOX1-associated GO terms across cancer lineages are Positive regulation of DNA metabolic process, Nucleic acid transport, and RNA transport. Each is linked with SOX1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SOX1-to-partner and partner-to-SOX1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SOX1→partner) and Y-score (partner→SOX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCPositive regulation of DNA metabolic process →+0.071+3.153<.001.00136
BONENucleic acid transport →+0.113+3.552.002<.00135
BONERNA transport →+0.113+3.552.002<.00135
BONEEstablishment of RNA localization →+0.109+3.215.002.00235
BONERNA localization →+0.108+2.488.003.00335
OESOPHAGUSRegulation of translational initiation →+0.075+0.565<.001.00635
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,084 associations by consensus.

Exploration