SOWAHA

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SOWAHA mutation is significantly associated with the RNA expression of many other genes, with 38 significant associations in total. CNS shows the largest number of these associations.

The most reproducible SOWAHA-associated genes across cancer lineages are LCE2C, KRTAP10-1, and SULT6B1. Each is linked with SOWAHA in more than 1 cancer types. Because this analysis shows association rather than direction, both SOWAHA-to-partner and partner-to-SOWAHA results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SOWAHA→partner) and Y-score (partner→SOWAHA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADLCE2C →+0.023+4.078<.001.00932
SOFT_TISSUEKRTAP10-1 →+0.058+5.369<.001.00431
SKINSULT6B1 →+0.105+2.657<.001.00731
SKINLRP1B →+0.366+3.362<.001.00531
SKINC2CD4B →+0.033+3.099<.001.00231
BLOOD_LeukemiaEPPIN →+0.005+4.507.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 38 associations by consensus.

Exploration