SON

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SON mutation is significantly associated with the total protein of many other genes, with 57 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SON-associated genes across cancer lineages are PCNA, eEF2, and GAPDH. Each is linked with SON in more than 3 cancer types. Because this analysis shows association rather than direction, both SON-to-partner and partner-to-SON results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by SON-low versus SON-high in STAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SON→partner) and Y-score (partner→SON) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADPCNA →+0.319+3.169.018.01824
UCECeEF2 →+0.229+1.662.012.00933
UCECGAPDH →+0.310+1.064.025.04333
UCECRad50 →-0.149-0.830.017.04933
UCECSTAT3_pY705 →-0.300-1.087<.001.01033
COADATM →-0.601-3.459<.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 57 associations by consensus.

PCNA by SON expression — STAD

Box plot of PCNA in SON-low vs SON-high samples in STAD.

Explore this box plot interactively →

Exploration