SON

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SON RNA expression is significantly associated with the go_rna of many other GO terms, with 4,200 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SON-associated GO terms across cancer lineages are Protein localization to nucleus, Nuclear export, and Protein sumoylation. Each is linked with SON in more than 17 cancer types. Because this analysis shows association rather than direction, both SON-to-partner and partner-to-SON results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein localization to nucleus grouped by SON-low versus SON-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SON→partner) and Y-score (partner→SON) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTProtein localization to nucleus →+0.065+1.125<.001.001318
SOFT_TISSUENuclear export →+0.087+0.935.002.001318
STOMACHProtein sumoylation →+0.092+0.613<.001.004317
OESOPHAGUSRNA export from nucleus →+0.130+0.686.006.006316
BLOOD_MyelomaNucleocytoplasmic transport →+0.072+0.946.001<.001316
SOFT_TISSUEMicrotubule cytoskeleton organization involved in mitosis →+0.083+0.822.007.004316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,200 associations by consensus.

Protein localization to nucleus by SON expression — UPPER_AERODIGESTIVE_TRACT

Box plot of Protein localization to nucleus in SON-low vs SON-high samples in UPPER_AERODIGESTIVE_TRACT.

Explore this box plot interactively →

Exploration