SOGA3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SOGA3 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,415 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SOGA3-associated GO terms across cancer lineages are Negative regulation of post-translational protein modification, Negative regulation of calcium ion export across plasma membrane, and Cell division. Each is linked with SOGA3 in more than 11 cancer types. Because this analysis shows association rather than direction, both SOGA3-to-partner and partner-to-SOGA3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SOGA3→partner) and Y-score (partner→SOGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCNegative regulation of post-translational protein modification →+0.078+1.697.002.001312
UPPER_AERODIGESTIVE_TRACTNegative regulation of calcium ion export across plasma membrane →+0.091+0.263<.001.003311
BREASTCell division →+0.089+0.319<.001.001311
BREASTRegulation of intracellular protein transport →+0.065+0.271.001.003311
CNSProcess utilizing autophagic mechanism →+0.023+0.625.003.002212
CNSAutophagy →+0.023+0.625.003.002212
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,415 associations by consensus.

Exploration