SOD3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SOD3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,753 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SOD3-associated GO terms across cancer lineages are Positive regulation of ruffle assembly, Viral process, and Regulation of protein localization to plasma membrane. Each is linked with SOD3 in more than 7 cancer types. Because this analysis shows association rather than direction, both SOD3-to-partner and partner-to-SOD3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of ruffle assembly grouped by SOD3-low versus SOD3-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SOD3→partner) and Y-score (partner→SOD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEPositive regulation of ruffle assembly →+0.180+2.403<.001<.00138
BONEViral process →+0.080+1.907<.001<.00138
BONERegulation of protein localization to plasma membrane →+0.134+2.513<.001<.00138
BONERegulation of protein localization to membrane →+0.069+1.958<.001<.00138
LUNG_NSCLC_LUADPositive regulation of protein localization to membrane →+0.077+1.550<.001<.00137
BONEViral life cycle →+0.145+2.852<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,753 associations by consensus.

Positive regulation of ruffle assembly by SOD3 expression — BONE

Box plot of Positive regulation of ruffle assembly in SOD3-low vs SOD3-high samples in BONE.

Explore this box plot interactively →

Exploration